Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdk5rap1Q8BTW8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdk5rap1Q8BTW8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdk5rap1Q8BTW8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdk5rap1Q8BTW8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdk5rap1Q8BTW8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdk5rap1Q8BTW8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm10812-201ENSMUST00000099864 546 ntBASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdk5rap1Q8BTW8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm11249-201ENSMUST00000117071 859 ntBASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms