Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
Trpa1Q8BLA8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpa1Q8BLA8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpa1Q8BLA8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpa1Q8BLA8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.34■□□□□ 0.69
Trpa1Q8BLA8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpa1Q8BLA8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.33■□□□□ 0.69
Trpa1Q8BLA8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trpa1Q8BLA8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.32■□□□□ 0.68
Trpa1Q8BLA8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trpa1Q8BLA8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trpa1Q8BLA8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trpa1Q8BLA8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.28■□□□□ 0.68
Trpa1Q8BLA8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms