Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smg1Q8BKX6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smg1Q8BKX6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Gm28033-201ENSMUST00000184224 96 ntBASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smg1Q8BKX6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Odf3b-204ENSMUST00000227834 930 ntBASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smg1Q8BKX6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smg1Q8BKX6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Notumos-201ENSMUST00000151998 2659 ntBASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Gm3375-201ENSMUST00000203929 796 ntBASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smg1Q8BKX6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.73■□□□□ 0.11
Smg1Q8BKX6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.72■□□□□ 0.11
Smg1Q8BKX6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smg1Q8BKX6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smg1Q8BKX6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smg1Q8BKX6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smg1Q8BKX6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.71■□□□□ 0.1
Smg1Q8BKX6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smg1Q8BKX6 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smg1Q8BKX6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Gm18032-201ENSMUST00000222541 538 ntBASIC15.69■□□□□ 0.1
Smg1Q8BKX6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms