Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc40Q8BI79 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc40Q8BI79 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 BC021767-201ENSMUST00000126387 1716 ntBASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Gm9988-201ENSMUST00000069786 435 ntBASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc40Q8BI79 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc40Q8BI79 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc40Q8BI79 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Ccdc40Q8BI79 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc40Q8BI79 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc40Q8BI79 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Reep4-203ENSMUST00000226563 1444 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms