Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc5a7Q8BGY9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc5a7Q8BGY9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc5a7Q8BGY9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Cap2-205ENSMUST00000225824 1634 ntBASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc5a7Q8BGY9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc5a7Q8BGY9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc5a7Q8BGY9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc5a7Q8BGY9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms