Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc116Q80X53 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc116Q80X53 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc116Q80X53 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc116Q80X53 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ccdc116Q80X53 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.08■□□□□ 0.49
Ccdc116Q80X53 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc116Q80X53 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ccdc116Q80X53 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc116Q80X53 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.08■□□□□ 0.48
Ccdc116Q80X53 Gm10493-201ENSMUST00000097270 612 ntBASIC18.08■□□□□ 0.48
Ccdc116Q80X53 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc116Q80X53 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc116Q80X53 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc116Q80X53 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ccdc116Q80X53 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ccdc116Q80X53 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc116Q80X53 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.06■□□□□ 0.48
Ccdc116Q80X53 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.06■□□□□ 0.48
Ccdc116Q80X53 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.06■□□□□ 0.48
Ccdc116Q80X53 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc116Q80X53 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc116Q80X53 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Fst-202ENSMUST00000223640 2612 ntBASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc116Q80X53 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc116Q80X53 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms