Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm3Q80WV7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Srrm3Q80WV7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm3Q80WV7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.17■□□□□ 0.66
Srrm3Q80WV7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.17■□□□□ 0.66
Srrm3Q80WV7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Gm8969-201ENSMUST00000199694 526 ntBASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm3Q80WV7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.15■□□□□ 0.66
Srrm3Q80WV7 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.15■□□□□ 0.66
Srrm3Q80WV7 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.15■□□□□ 0.66
Srrm3Q80WV7 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Srrm3Q80WV7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Srrm3Q80WV7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Srrm3Q80WV7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Srrm3Q80WV7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm3Q80WV7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Srrm3Q80WV7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms