Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.8■□□□□ 0.44
Trim36Q80WG7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim36Q80WG7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.78■□□□□ 0.44
Trim36Q80WG7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.78■□□□□ 0.44
Trim36Q80WG7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim36Q80WG7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.77■□□□□ 0.44
Trim36Q80WG7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim36Q80WG7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim36Q80WG7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim36Q80WG7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim36Q80WG7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.76■□□□□ 0.43
Trim36Q80WG7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trim36Q80WG7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim36Q80WG7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.75■□□□□ 0.43
Trim36Q80WG7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.75■□□□□ 0.43
Trim36Q80WG7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim36Q80WG7 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.74■□□□□ 0.43
Trim36Q80WG7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.74■□□□□ 0.43
Trim36Q80WG7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms