Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.98■□□□□ 0.31
Pif1Q80SX8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.98■□□□□ 0.31
Pif1Q80SX8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.98■□□□□ 0.31
Pif1Q80SX8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pif1Q80SX8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.98■□□□□ 0.31
Pif1Q80SX8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pif1Q80SX8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Gm715-201ENSMUST00000117865 831 ntBASIC16.97■□□□□ 0.31
Pif1Q80SX8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Gm7977-201ENSMUST00000193787 748 ntBASIC16.97■□□□□ 0.31
Pif1Q80SX8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pif1Q80SX8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Gm15378-201ENSMUST00000121894 207 ntBASIC16.96■□□□□ 0.31
Pif1Q80SX8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Gm10698-201ENSMUST00000182663 604 ntBASIC16.96■□□□□ 0.31
Pif1Q80SX8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pif1Q80SX8 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.96■□□□□ 0.31
Pif1Q80SX8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pif1Q80SX8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pif1Q80SX8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pif1Q80SX8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pif1Q80SX8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.95■□□□□ 0.3
Pif1Q80SX8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pif1Q80SX8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pif1Q80SX8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pif1Q80SX8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pif1Q80SX8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pif1Q80SX8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pif1Q80SX8 Gm13836-201ENSMUST00000121159 501 ntBASIC16.94■□□□□ 0.3
Pif1Q80SX8 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.94■□□□□ 0.3
Pif1Q80SX8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pif1Q80SX8 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.94■□□□□ 0.3
Pif1Q80SX8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pif1Q80SX8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Gm13158-201ENSMUST00000122007 736 ntBASIC16.93■□□□□ 0.3
Pif1Q80SX8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pif1Q80SX8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pif1Q80SX8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.92■□□□□ 0.3
Pif1Q80SX8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms