Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ubfd1Q78JW9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ubfd1Q78JW9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ubfd1Q78JW9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ubfd1Q78JW9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ubfd1Q78JW9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubfd1Q78JW9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ubfd1Q78JW9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ubfd1Q78JW9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ubfd1Q78JW9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubfd1Q78JW9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubfd1Q78JW9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubfd1Q78JW9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubfd1Q78JW9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubfd1Q78JW9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms