Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx58Q6Q899 Gm13158-201ENSMUST00000122007 736 ntBASIC22.89■■□□□ 1.25
Ddx58Q6Q899 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx58Q6Q899 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Gm10252-201ENSMUST00000209541 832 ntBASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx58Q6Q899 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx58Q6Q899 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx58Q6Q899 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx58Q6Q899 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx58Q6Q899 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Gm10698-201ENSMUST00000182663 604 ntBASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Zfp783-201ENSMUST00000095946 670 ntBASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx58Q6Q899 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx58Q6Q899 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx58Q6Q899 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx58Q6Q899 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.81■■□□□ 1.24
Ddx58Q6Q899 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx58Q6Q899 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx58Q6Q899 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx58Q6Q899 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx58Q6Q899 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Ddx58Q6Q899 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Gm15378-201ENSMUST00000121894 207 ntBASIC22.79■■□□□ 1.24
Ddx58Q6Q899 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms