Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scaf4Q6PFF0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scaf4Q6PFF0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.21■□□□□ 0.5
Scaf4Q6PFF0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.21■□□□□ 0.5
Scaf4Q6PFF0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Smad6-203ENSMUST00000179458 273 ntBASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scaf4Q6PFF0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scaf4Q6PFF0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scaf4Q6PFF0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scaf4Q6PFF0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scaf4Q6PFF0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.15■□□□□ 0.5
Scaf4Q6PFF0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms