Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcc2Q6PDG5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcc2Q6PDG5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcc2Q6PDG5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Smarcc2Q6PDG5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Nespas-201ENSMUST00000143738 1083 ntBASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcc2Q6PDG5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Gm10602-201ENSMUST00000098239 609 ntBASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcc2Q6PDG5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Gm12933-201ENSMUST00000120203 872 ntBASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcc2Q6PDG5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcc2Q6PDG5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcc2Q6PDG5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms