Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Gm44549-201ENSMUST00000208351 577 ntBASIC21.36■■□□□ 1.01
Usp50Q6P8X6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp50Q6P8X6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp50Q6P8X6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Usp50Q6P8X6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp50Q6P8X6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp50Q6P8X6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Usp50Q6P8X6 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.33■■□□□ 1.01
Usp50Q6P8X6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp50Q6P8X6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Usp50Q6P8X6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp50Q6P8X6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp50Q6P8X6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.33■■□□□ 1
Usp50Q6P8X6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp50Q6P8X6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp50Q6P8X6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Usp50Q6P8X6 Trmt13-210ENSMUST00000198454 880 ntBASIC21.32■■□□□ 1
Usp50Q6P8X6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp50Q6P8X6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp50Q6P8X6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp50Q6P8X6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp50Q6P8X6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp50Q6P8X6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Usp50Q6P8X6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.31■■□□□ 1
Usp50Q6P8X6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp50Q6P8X6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Usp50Q6P8X6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Usp50Q6P8X6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Usp50Q6P8X6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Usp50Q6P8X6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Usp50Q6P8X6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp50Q6P8X6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Usp50Q6P8X6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usp50Q6P8X6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Usp50Q6P8X6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.29■■□□□ 1
Usp50Q6P8X6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Usp50Q6P8X6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp50Q6P8X6 Gm20760-201ENSMUST00000179197 648 ntBASIC21.29■■□□□ 1
Usp50Q6P8X6 Gm2559-201ENSMUST00000201323 363 ntBASIC21.29■■□□□ 1
Usp50Q6P8X6 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.29■■□□□ 1
Usp50Q6P8X6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp50Q6P8X6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usp50Q6P8X6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.29■■□□□ 1
Usp50Q6P8X6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.28■■□□□ 1
Usp50Q6P8X6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.28■■□□□ 1
Usp50Q6P8X6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.28■■□□□ 1
Usp50Q6P8X6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 Dio3-201ENSMUST00000097228 1449 ntBASIC21.28■■□□□ 1
Usp50Q6P8X6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Usp50Q6P8X6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp50Q6P8X6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usp50Q6P8X6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp50Q6P8X6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Usp50Q6P8X6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.27■■□□□ 1
Usp50Q6P8X6 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.27■■□□□ 1
Usp50Q6P8X6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.27■■□□□ 1
Usp50Q6P8X6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.27■■□□□ 1
Usp50Q6P8X6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp50Q6P8X6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usp50Q6P8X6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Usp50Q6P8X6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Gm2399-201ENSMUST00000104944 225 ntBASIC21.25■□□□□ 0.99
Usp50Q6P8X6 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms