Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Casc4Q6P2L7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Casc4Q6P2L7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.65■□□□□ 0.58
Casc4Q6P2L7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Casc4Q6P2L7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Casc4Q6P2L7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Casc4Q6P2L7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Casc4Q6P2L7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Casc4Q6P2L7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.61■□□□□ 0.57
Casc4Q6P2L7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms