Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Pds5aQ6A026 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pds5aQ6A026 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.92■□□□□ 0.78
Pds5aQ6A026 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pds5aQ6A026 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pds5aQ6A026 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.92■□□□□ 0.78
Pds5aQ6A026 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.91■□□□□ 0.78
Pds5aQ6A026 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pds5aQ6A026 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Gm12441-201ENSMUST00000121806 588 ntBASIC19.9■□□□□ 0.78
Pds5aQ6A026 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.9■□□□□ 0.78
Pds5aQ6A026 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pds5aQ6A026 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.9■□□□□ 0.78
Pds5aQ6A026 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Pds5aQ6A026 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pds5aQ6A026 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pds5aQ6A026 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.87■□□□□ 0.77
Pds5aQ6A026 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.87■□□□□ 0.77
Pds5aQ6A026 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.87■□□□□ 0.77
Pds5aQ6A026 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.86■□□□□ 0.77
Pds5aQ6A026 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pds5aQ6A026 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Gm22325-201ENSMUST00000158904 308 ntBASIC19.85■□□□□ 0.77
Pds5aQ6A026 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pds5aQ6A026 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pds5aQ6A026 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms