Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
Ptch1Q61115 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ptch1Q61115 Gm14859-201ENSMUST00000117752 357 ntBASIC26.92■■□□□ 1.9
Ptch1Q61115 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ptch1Q61115 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ptch1Q61115 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC26.92■■□□□ 1.9
Ptch1Q61115 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC26.92■■□□□ 1.9
Ptch1Q61115 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ptch1Q61115 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ptch1Q61115 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ptch1Q61115 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ptch1Q61115 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ptch1Q61115 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ptch1Q61115 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ptch1Q61115 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ptch1Q61115 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Ptch1Q61115 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
Ptch1Q61115 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC26.9■■□□□ 1.9
Ptch1Q61115 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptch1Q61115 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptch1Q61115 Gm10654-201ENSMUST00000098653 1633 ntBASIC26.9■■□□□ 1.9
Ptch1Q61115 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ptch1Q61115 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Ptch1Q61115 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptch1Q61115 Gm7284-201ENSMUST00000131667 944 ntBASIC26.9■■□□□ 1.9
Ptch1Q61115 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC26.9■■□□□ 1.9
Ptch1Q61115 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ptch1Q61115 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ptch1Q61115 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC26.89■■□□□ 1.9
Ptch1Q61115 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ptch1Q61115 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
Ptch1Q61115 AC134329.2-201ENSMUST00000217897 428 ntBASIC26.89■■□□□ 1.89
Ptch1Q61115 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ptch1Q61115 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ptch1Q61115 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC26.88■■□□□ 1.89
Ptch1Q61115 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC26.88■■□□□ 1.89
Ptch1Q61115 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ptch1Q61115 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
Ptch1Q61115 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC26.87■■□□□ 1.89
Ptch1Q61115 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC26.87■■□□□ 1.89
Ptch1Q61115 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ptch1Q61115 Mir5130-201ENSMUST00000175160 84 ntBASIC26.87■■□□□ 1.89
Ptch1Q61115 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Ptch1Q61115 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ptch1Q61115 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ptch1Q61115 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ptch1Q61115 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ptch1Q61115 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ptch1Q61115 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Ptch1Q61115 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC26.86■■□□□ 1.89
Ptch1Q61115 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ptch1Q61115 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ptch1Q61115 Gm43353-201ENSMUST00000199224 1295 ntBASIC26.86■■□□□ 1.89
Ptch1Q61115 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Ptch1Q61115 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ptch1Q61115 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC26.85■■□□□ 1.89
Ptch1Q61115 Gm27463-201ENSMUST00000183569 57 ntBASIC26.85■■□□□ 1.89
Ptch1Q61115 Gm18101-201ENSMUST00000215769 548 ntBASIC26.85■■□□□ 1.89
Ptch1Q61115 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC26.85■■□□□ 1.89
Ptch1Q61115 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC26.85■■□□□ 1.89
Ptch1Q61115 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptch1Q61115 Gm12085-201ENSMUST00000119263 940 ntBASIC26.84■■□□□ 1.89
Ptch1Q61115 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptch1Q61115 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC26.84■■□□□ 1.89
Ptch1Q61115 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC26.84■■□□□ 1.89
Ptch1Q61115 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Ptch1Q61115 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptch1Q61115 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptch1Q61115 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ptch1Q61115 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ptch1Q61115 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ptch1Q61115 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC26.83■■□□□ 1.89
Ptch1Q61115 Gm17661-201ENSMUST00000170317 270 ntBASIC26.83■■□□□ 1.89
Ptch1Q61115 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC26.83■■□□□ 1.89
Ptch1Q61115 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ptch1Q61115 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ptch1Q61115 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Ptch1Q61115 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ptch1Q61115 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ptch1Q61115 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC26.83■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms