Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.91■□□□□ 0.3
Foxd3Q61060 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Foxd3Q61060 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.91■□□□□ 0.3
Foxd3Q61060 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxd3Q61060 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Foxd3Q61060 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Foxd3Q61060 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Foxd3Q61060 Gm27801-201ENSMUST00000184174 223 ntBASIC16.9■□□□□ 0.3
Foxd3Q61060 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Foxd3Q61060 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Foxd3Q61060 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxd3Q61060 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Foxd3Q61060 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Foxd3Q61060 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.89■□□□□ 0.29
Foxd3Q61060 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Foxd3Q61060 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxd3Q61060 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Foxd3Q61060 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.88■□□□□ 0.29
Foxd3Q61060 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Foxd3Q61060 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Foxd3Q61060 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.88■□□□□ 0.29
Foxd3Q61060 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.88■□□□□ 0.29
Foxd3Q61060 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.88■□□□□ 0.29
Foxd3Q61060 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Foxd3Q61060 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Foxd3Q61060 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxd3Q61060 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Foxd3Q61060 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Foxd3Q61060 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.87■□□□□ 0.29
Foxd3Q61060 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.87■□□□□ 0.29
Foxd3Q61060 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.87■□□□□ 0.29
Foxd3Q61060 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxd3Q61060 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Foxd3Q61060 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.86■□□□□ 0.29
Foxd3Q61060 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.86■□□□□ 0.29
Foxd3Q61060 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.86■□□□□ 0.29
Foxd3Q61060 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.86■□□□□ 0.29
Foxd3Q61060 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxd3Q61060 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms