Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trpc1Q61056 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trpc1Q61056 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trpc1Q61056 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trpc1Q61056 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trpc1Q61056 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trpc1Q61056 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.94■□□□□ 0.46
Trpc1Q61056 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.94■□□□□ 0.46
Trpc1Q61056 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.94■□□□□ 0.46
Trpc1Q61056 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.94■□□□□ 0.46
Trpc1Q61056 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trpc1Q61056 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.94■□□□□ 0.46
Trpc1Q61056 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trpc1Q61056 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.94■□□□□ 0.46
Trpc1Q61056 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Grk6-206ENSMUST00000224995 2971 ntBASIC17.93■□□□□ 0.46
Trpc1Q61056 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trpc1Q61056 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.93■□□□□ 0.46
Trpc1Q61056 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trpc1Q61056 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.92■□□□□ 0.46
Trpc1Q61056 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trpc1Q61056 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trpc1Q61056 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trpc1Q61056 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trpc1Q61056 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trpc1Q61056 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.91■□□□□ 0.46
Trpc1Q61056 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.91■□□□□ 0.46
Trpc1Q61056 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.91■□□□□ 0.46
Trpc1Q61056 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trpc1Q61056 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.91■□□□□ 0.46
Trpc1Q61056 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trpc1Q61056 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Trpc1Q61056 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trpc1Q61056 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms