Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpbQ60649 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpbQ60649 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ClpbQ60649 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ClpbQ60649 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.67■□□□□ 0.42
ClpbQ60649 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ClpbQ60649 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpbQ60649 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.67■□□□□ 0.42
ClpbQ60649 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ClpbQ60649 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpbQ60649 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpbQ60649 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
ClpbQ60649 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.66■□□□□ 0.42
ClpbQ60649 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ClpbQ60649 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.66■□□□□ 0.42
ClpbQ60649 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ClpbQ60649 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpbQ60649 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.65■□□□□ 0.42
ClpbQ60649 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ClpbQ60649 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.65■□□□□ 0.42
ClpbQ60649 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClpbQ60649 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.65■□□□□ 0.42
ClpbQ60649 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
ClpbQ60649 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpbQ60649 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpbQ60649 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ClpbQ60649 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ClpbQ60649 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Gm6420-201ENSMUST00000193885 723 ntBASIC17.64■□□□□ 0.41
ClpbQ60649 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.64■□□□□ 0.41
ClpbQ60649 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
ClpbQ60649 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpbQ60649 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.63■□□□□ 0.41
ClpbQ60649 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.63■□□□□ 0.41
ClpbQ60649 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ClpbQ60649 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.63■□□□□ 0.41
ClpbQ60649 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ClpbQ60649 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Mir5133-201ENSMUST00000174955 77 ntBASIC17.63■□□□□ 0.41
ClpbQ60649 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.63■□□□□ 0.41
ClpbQ60649 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpbQ60649 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.62■□□□□ 0.41
ClpbQ60649 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpbQ60649 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.62■□□□□ 0.41
ClpbQ60649 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.62■□□□□ 0.41
ClpbQ60649 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.61■□□□□ 0.41
ClpbQ60649 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ClpbQ60649 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms