Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Gm42778-201ENSMUST00000199644 553 ntBASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5d-4Q5R1F6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Gm13146-201ENSMUST00000118508 780 ntBASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Gm10493-201ENSMUST00000097270 612 ntBASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5d-4Q5R1F6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5d-4Q5R1F6 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav5d-4Q5R1F6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5d-4Q5R1F6 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.83■□□□□ 0.13
Trav5d-4Q5R1F6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav5d-4Q5R1F6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5d-4Q5R1F6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5d-4Q5R1F6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5d-4Q5R1F6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms