Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn2bQ56A07 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Scn2bQ56A07 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.28■□□□□ 0.52
Scn2bQ56A07 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scn2bQ56A07 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Scn2bQ56A07 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scn2bQ56A07 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scn2bQ56A07 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.26■□□□□ 0.51
Scn2bQ56A07 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scn2bQ56A07 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scn2bQ56A07 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Scn2bQ56A07 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.24■□□□□ 0.51
Scn2bQ56A07 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2bQ56A07 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.24■□□□□ 0.51
Scn2bQ56A07 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn2bQ56A07 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
Scn2bQ56A07 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.23■□□□□ 0.51
Scn2bQ56A07 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Scn2bQ56A07 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn2bQ56A07 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2bQ56A07 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Gm18284-201ENSMUST00000172604 624 ntBASIC18.22■□□□□ 0.51
Scn2bQ56A07 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Gm5874-201ENSMUST00000096101 508 ntBASIC18.22■□□□□ 0.51
Scn2bQ56A07 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2bQ56A07 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Scn2bQ56A07 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.21■□□□□ 0.51
Scn2bQ56A07 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.21■□□□□ 0.51
Scn2bQ56A07 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms