Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf38aQ4FK66 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Gm18666-201ENSMUST00000190039 958 ntBASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Gm10252-201ENSMUST00000209541 832 ntBASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf38aQ4FK66 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf38aQ4FK66 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Gm11927-201ENSMUST00000118472 759 ntBASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.54■■□□□ 1.04
Prpf38aQ4FK66 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf38aQ4FK66 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Gm13158-201ENSMUST00000122007 736 ntBASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf38aQ4FK66 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Prpf38aQ4FK66 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Prpf38aQ4FK66 Iqck-206ENSMUST00000208658 2891 ntBASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf38aQ4FK66 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms