Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdkl5Q3UTQ8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl5Q3UTQ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkl5Q3UTQ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdkl5Q3UTQ8 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.39■■□□□ 1.02
Cdkl5Q3UTQ8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Gm10849-201ENSMUST00000100397 618 ntBASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl5Q3UTQ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkl5Q3UTQ8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl5Q3UTQ8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkl5Q3UTQ8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Gm26571-201ENSMUST00000181399 666 ntBASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Gm42569-201ENSMUST00000200539 472 ntBASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl5Q3UTQ8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl5Q3UTQ8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms