Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Naf1Q3UMQ8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Naf1Q3UMQ8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Naf1Q3UMQ8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Naf1Q3UMQ8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Gm11249-201ENSMUST00000117071 859 ntBASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Naf1Q3UMQ8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Naf1Q3UMQ8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Naf1Q3UMQ8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms