Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim7Q3TJD7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim7Q3TJD7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim7Q3TJD7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Pdlim7Q3TJD7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim7Q3TJD7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim7Q3TJD7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim7Q3TJD7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim7Q3TJD7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pdlim7Q3TJD7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim7Q3TJD7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Pdlim7Q3TJD7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim7Q3TJD7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pdlim7Q3TJD7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim7Q3TJD7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim7Q3TJD7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Gm27741-201ENSMUST00000185060 237 ntBASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Gm18025-201ENSMUST00000221733 862 ntBASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Odf3b-204ENSMUST00000227834 930 ntBASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim7Q3TJD7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms