Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd8Q09XV5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Gm27389-201ENSMUST00000183622 195 ntBASIC16.66■□□□□ 0.26
Chd8Q09XV5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.66■□□□□ 0.26
Chd8Q09XV5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd8Q09XV5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd8Q09XV5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd8Q09XV5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd8Q09XV5 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.64■□□□□ 0.25
Chd8Q09XV5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.64■□□□□ 0.25
Chd8Q09XV5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.64■□□□□ 0.25
Chd8Q09XV5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chd8Q09XV5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Gm38027-201ENSMUST00000192315 235 ntBASIC16.63■□□□□ 0.25
Chd8Q09XV5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.63■□□□□ 0.25
Chd8Q09XV5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chd8Q09XV5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.62■□□□□ 0.25
Chd8Q09XV5 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.62■□□□□ 0.25
Chd8Q09XV5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Gm11452-201ENSMUST00000122376 690 ntBASIC16.62■□□□□ 0.25
Chd8Q09XV5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd8Q09XV5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Gm16061-201ENSMUST00000122167 857 ntBASIC16.61■□□□□ 0.25
Chd8Q09XV5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.61■□□□□ 0.25
Chd8Q09XV5 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.61■□□□□ 0.25
Chd8Q09XV5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd8Q09XV5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Olfr129-201ENSMUST00000122318 993 ntBASIC16.6■□□□□ 0.25
Chd8Q09XV5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.6■□□□□ 0.25
Chd8Q09XV5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.6■□□□□ 0.25
Chd8Q09XV5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms