Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Mtag2-201ENSMUST00000058665 714 ntBASIC13.76□□□□□ -0.21
Hspg2Q05793 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.75□□□□□ -0.21
Hspg2Q05793 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.75□□□□□ -0.21
Hspg2Q05793 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.75□□□□□ -0.21
Hspg2Q05793 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hspg2Q05793 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.75□□□□□ -0.21
Hspg2Q05793 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Hspg2Q05793 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hspg2Q05793 AA414768-201ENSMUST00000121924 1257 ntBASIC13.75□□□□□ -0.21
Hspg2Q05793 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.75□□□□□ -0.21
Hspg2Q05793 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hspg2Q05793 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.74□□□□□ -0.21
Hspg2Q05793 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hspg2Q05793 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.74□□□□□ -0.21
Hspg2Q05793 Gm42545-201ENSMUST00000202755 922 ntBASIC13.74□□□□□ -0.21
Hspg2Q05793 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.73□□□□□ -0.21
Hspg2Q05793 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hspg2Q05793 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.73□□□□□ -0.21
Hspg2Q05793 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hspg2Q05793 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.72□□□□□ -0.21
Hspg2Q05793 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Hspg2Q05793 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Hspg2Q05793 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Hspg2Q05793 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hspg2Q05793 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hspg2Q05793 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.71□□□□□ -0.21
Hspg2Q05793 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Gm3375-201ENSMUST00000203929 796 ntBASIC13.71□□□□□ -0.21
Hspg2Q05793 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hspg2Q05793 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.71□□□□□ -0.22
Hspg2Q05793 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.71□□□□□ -0.22
Hspg2Q05793 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hspg2Q05793 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hspg2Q05793 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.7□□□□□ -0.22
Hspg2Q05793 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.7□□□□□ -0.22
Hspg2Q05793 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.7□□□□□ -0.22
Hspg2Q05793 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms