Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.02■□□□□ 0.96
GabpaQ00422 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GabpaQ00422 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
GabpaQ00422 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GabpaQ00422 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
GabpaQ00422 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.01■□□□□ 0.95
GabpaQ00422 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GabpaQ00422 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GabpaQ00422 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21■□□□□ 0.95
GabpaQ00422 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 AC153881.1-201ENSMUST00000214448 284 ntBASIC21■□□□□ 0.95
GabpaQ00422 AC154649.1-201ENSMUST00000227392 384 ntBASIC21■□□□□ 0.95
GabpaQ00422 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GabpaQ00422 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.99■□□□□ 0.95
GabpaQ00422 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GabpaQ00422 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GabpaQ00422 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GabpaQ00422 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GabpaQ00422 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GabpaQ00422 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GabpaQ00422 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GabpaQ00422 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.98■□□□□ 0.95
GabpaQ00422 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Gm15378-201ENSMUST00000121894 207 ntBASIC20.98■□□□□ 0.95
GabpaQ00422 Gm6576-201ENSMUST00000169678 883 ntBASIC20.98■□□□□ 0.95
GabpaQ00422 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.98■□□□□ 0.95
GabpaQ00422 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.98■□□□□ 0.95
GabpaQ00422 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
GabpaQ00422 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GabpaQ00422 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GabpaQ00422 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.97■□□□□ 0.95
GabpaQ00422 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Mir6982-201ENSMUST00000184354 68 ntBASIC20.97■□□□□ 0.95
GabpaQ00422 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.97■□□□□ 0.95
GabpaQ00422 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.97■□□□□ 0.95
GabpaQ00422 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GabpaQ00422 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
GabpaQ00422 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.96■□□□□ 0.95
GabpaQ00422 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.96■□□□□ 0.95
GabpaQ00422 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.96■□□□□ 0.95
GabpaQ00422 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.96■□□□□ 0.95
GabpaQ00422 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GabpaQ00422 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GabpaQ00422 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.95■□□□□ 0.94
GabpaQ00422 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GabpaQ00422 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.95■□□□□ 0.94
GabpaQ00422 Zfp783-201ENSMUST00000095946 670 ntBASIC20.95■□□□□ 0.94
GabpaQ00422 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.95■□□□□ 0.94
GabpaQ00422 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GabpaQ00422 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.94■□□□□ 0.94
GabpaQ00422 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.94■□□□□ 0.94
GabpaQ00422 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GabpaQ00422 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
GabpaQ00422 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GabpaQ00422 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GabpaQ00422 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms