Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.8□□□□□ -0.36
PrkdcP97313 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.8□□□□□ -0.36
PrkdcP97313 Gm12085-201ENSMUST00000119263 940 ntBASIC12.8□□□□□ -0.36
PrkdcP97313 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PrkdcP97313 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
PrkdcP97313 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC12.79□□□□□ -0.36
PrkdcP97313 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.79□□□□□ -0.36
PrkdcP97313 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Gm25016-201ENSMUST00000158399 131 ntBASIC12.79□□□□□ -0.36
PrkdcP97313 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PrkdcP97313 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 Gm21559-201ENSMUST00000220638 855 ntBASIC12.78□□□□□ -0.36
PrkdcP97313 Gm8587-201ENSMUST00000076538 843 ntBASIC12.78□□□□□ -0.36
PrkdcP97313 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.78□□□□□ -0.36
PrkdcP97313 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.78□□□□□ -0.36
PrkdcP97313 Gm27525-201ENSMUST00000184465 107 ntBASIC12.78□□□□□ -0.36
PrkdcP97313 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.78□□□□□ -0.36
PrkdcP97313 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.78□□□□□ -0.36
PrkdcP97313 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.78□□□□□ -0.36
PrkdcP97313 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PrkdcP97313 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC12.78□□□□□ -0.36
PrkdcP97313 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC12.78□□□□□ -0.36
PrkdcP97313 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PrkdcP97313 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.77□□□□□ -0.36
PrkdcP97313 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PrkdcP97313 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.77□□□□□ -0.36
PrkdcP97313 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PrkdcP97313 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PrkdcP97313 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Gm29518-201ENSMUST00000190858 372 ntBASIC12.77□□□□□ -0.37
PrkdcP97313 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PrkdcP97313 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.77□□□□□ -0.37
PrkdcP97313 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PrkdcP97313 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PrkdcP97313 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PrkdcP97313 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PrkdcP97313 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.76□□□□□ -0.37
PrkdcP97313 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Dmtn-209ENSMUST00000228295 2572 ntBASIC12.76□□□□□ -0.37
PrkdcP97313 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.76□□□□□ -0.37
PrkdcP97313 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Mir6349-201ENSMUST00000184059 97 ntBASIC12.76□□□□□ -0.37
PrkdcP97313 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PrkdcP97313 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkdcP97313 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.75□□□□□ -0.37
PrkdcP97313 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.75□□□□□ -0.37
PrkdcP97313 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkdcP97313 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PrkdcP97313 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
PrkdcP97313 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC12.75□□□□□ -0.37
PrkdcP97313 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PrkdcP97313 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkdcP97313 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.75□□□□□ -0.37
PrkdcP97313 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.75□□□□□ -0.37
PrkdcP97313 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkdcP97313 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC12.75□□□□□ -0.37
PrkdcP97313 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
PrkdcP97313 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms