Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Six5P70178 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.28■□□□□ 0.36
Six5P70178 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Six5P70178 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.28■□□□□ 0.36
Six5P70178 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.28■□□□□ 0.36
Six5P70178 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Six5P70178 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.28■□□□□ 0.36
Six5P70178 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six5P70178 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Six5P70178 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Six5P70178 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
Six5P70178 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.27■□□□□ 0.36
Six5P70178 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Six5P70178 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six5P70178 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six5P70178 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six5P70178 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.27■□□□□ 0.35
Six5P70178 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six5P70178 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six5P70178 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Six5P70178 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Gm7290-201ENSMUST00000104990 617 ntBASIC17.26■□□□□ 0.35
Six5P70178 Gm12918-201ENSMUST00000120234 636 ntBASIC17.26■□□□□ 0.35
Six5P70178 Gm15710-201ENSMUST00000121821 636 ntBASIC17.26■□□□□ 0.35
Six5P70178 Gm5075-201ENSMUST00000196916 622 ntBASIC17.26■□□□□ 0.35
Six5P70178 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.26■□□□□ 0.35
Six5P70178 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.26■□□□□ 0.35
Six5P70178 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.26■□□□□ 0.35
Six5P70178 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six5P70178 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six5P70178 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Six5P70178 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Six5P70178 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.25■□□□□ 0.35
Six5P70178 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.25■□□□□ 0.35
Six5P70178 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Six5P70178 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Six5P70178 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six5P70178 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.24■□□□□ 0.35
Six5P70178 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Six5P70178 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.24■□□□□ 0.35
Six5P70178 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.24■□□□□ 0.35
Six5P70178 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Six5P70178 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six5P70178 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.23■□□□□ 0.35
Six5P70178 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Six5P70178 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Six5P70178 Gm7291-201ENSMUST00000199147 382 ntBASIC17.23■□□□□ 0.35
Six5P70178 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Six5P70178 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Six5P70178 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six5P70178 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms