Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lhx1P63006 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lhx1P63006 Gm10653-202ENSMUST00000139570 835 ntBASIC18.15■□□□□ 0.5
Lhx1P63006 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lhx1P63006 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lhx1P63006 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx1P63006 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Lhx1P63006 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lhx1P63006 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lhx1P63006 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lhx1P63006 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Lhx1P63006 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.14■□□□□ 0.49
Lhx1P63006 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.14■□□□□ 0.49
Lhx1P63006 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lhx1P63006 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lhx1P63006 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.14■□□□□ 0.49
Lhx1P63006 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx1P63006 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.13■□□□□ 0.49
Lhx1P63006 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.13■□□□□ 0.49
Lhx1P63006 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.13■□□□□ 0.49
Lhx1P63006 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lhx1P63006 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx1P63006 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx1P63006 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx1P63006 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx1P63006 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lhx1P63006 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx1P63006 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.12■□□□□ 0.49
Lhx1P63006 Gm12896-201ENSMUST00000118430 226 ntBASIC18.12■□□□□ 0.49
Lhx1P63006 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lhx1P63006 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.12■□□□□ 0.49
Lhx1P63006 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.12■□□□□ 0.49
Lhx1P63006 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx1P63006 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.12■□□□□ 0.49
Lhx1P63006 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Lhx1P63006 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lhx1P63006 Gm2399-201ENSMUST00000104944 225 ntBASIC18.11■□□□□ 0.49
Lhx1P63006 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Lhx1P63006 Gm37856-201ENSMUST00000191634 999 ntBASIC18.11■□□□□ 0.49
Lhx1P63006 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.11■□□□□ 0.49
Lhx1P63006 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Lhx1P63006 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.11■□□□□ 0.49
Lhx1P63006 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 BC021767-201ENSMUST00000126387 1716 ntBASIC18.11■□□□□ 0.49
Lhx1P63006 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx1P63006 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Lhx1P63006 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.1■□□□□ 0.49
Lhx1P63006 Dio3-201ENSMUST00000097228 1449 ntBASIC18.1■□□□□ 0.49
Lhx1P63006 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Lhx1P63006 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Trmt13-210ENSMUST00000198454 880 ntBASIC18.1■□□□□ 0.49
Lhx1P63006 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx1P63006 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.09■□□□□ 0.49
Lhx1P63006 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.09■□□□□ 0.49
Lhx1P63006 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Lhx1P63006 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms