Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.6■□□□□ 0.57
SmoP56726 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SmoP56726 Gm37856-201ENSMUST00000191634 999 ntBASIC18.6■□□□□ 0.57
SmoP56726 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.6■□□□□ 0.57
SmoP56726 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SmoP56726 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.6■□□□□ 0.57
SmoP56726 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Gm12896-201ENSMUST00000118430 226 ntBASIC18.59■□□□□ 0.57
SmoP56726 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SmoP56726 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SmoP56726 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SmoP56726 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SmoP56726 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SmoP56726 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SmoP56726 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
SmoP56726 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SmoP56726 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SmoP56726 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SmoP56726 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SmoP56726 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SmoP56726 Gm22325-201ENSMUST00000158904 308 ntBASIC18.58■□□□□ 0.56
SmoP56726 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SmoP56726 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.58■□□□□ 0.56
SmoP56726 Gm2559-201ENSMUST00000201323 363 ntBASIC18.58■□□□□ 0.56
SmoP56726 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.58■□□□□ 0.56
SmoP56726 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SmoP56726 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.57■□□□□ 0.56
SmoP56726 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.57■□□□□ 0.56
SmoP56726 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.57■□□□□ 0.56
SmoP56726 Gm20760-201ENSMUST00000179197 648 ntBASIC18.57■□□□□ 0.56
SmoP56726 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.57■□□□□ 0.56
SmoP56726 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SmoP56726 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SmoP56726 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
SmoP56726 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SmoP56726 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.57■□□□□ 0.56
SmoP56726 Dio3-201ENSMUST00000097228 1449 ntBASIC18.57■□□□□ 0.56
SmoP56726 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SmoP56726 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.56■□□□□ 0.56
SmoP56726 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SmoP56726 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.56■□□□□ 0.56
SmoP56726 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SmoP56726 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SmoP56726 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SmoP56726 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SmoP56726 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SmoP56726 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SmoP56726 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SmoP56726 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SmoP56726 Gm27275-201ENSMUST00000184318 272 ntBASIC18.55■□□□□ 0.56
SmoP56726 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.55■□□□□ 0.56
SmoP56726 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.55■□□□□ 0.56
SmoP56726 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SmoP56726 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SmoP56726 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SmoP56726 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.54■□□□□ 0.56
SmoP56726 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SmoP56726 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.54■□□□□ 0.56
SmoP56726 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SmoP56726 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.54■□□□□ 0.56
SmoP56726 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SmoP56726 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SmoP56726 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SmoP56726 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SmoP56726 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.53■□□□□ 0.56
SmoP56726 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SmoP56726 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms