Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Atp6v1aP50516 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Atp6v1aP50516 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.24■■□□□ 1.15
Atp6v1aP50516 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Atp6v1aP50516 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Atp6v1aP50516 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Atp6v1aP50516 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Zfp783-201ENSMUST00000095946 670 ntBASIC22.22■■□□□ 1.15
Atp6v1aP50516 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Atp6v1aP50516 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Atp6v1aP50516 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1aP50516 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.2■■□□□ 1.14
Atp6v1aP50516 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1aP50516 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atp6v1aP50516 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Atp6v1aP50516 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Atp6v1aP50516 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atp6v1aP50516 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Gm10138-203ENSMUST00000206952 366 ntBASIC22.18■■□□□ 1.14
Atp6v1aP50516 Gm30025-201ENSMUST00000218555 728 ntBASIC22.18■■□□□ 1.14
Atp6v1aP50516 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atp6v1aP50516 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.17■■□□□ 1.14
Atp6v1aP50516 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1aP50516 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.17■■□□□ 1.14
Atp6v1aP50516 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1aP50516 Gm21814-202ENSMUST00000203277 873 ntBASIC22.17■■□□□ 1.14
Atp6v1aP50516 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.17■■□□□ 1.14
Atp6v1aP50516 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1aP50516 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Atp6v1aP50516 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Atp6v1aP50516 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.16■■□□□ 1.14
Atp6v1aP50516 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atp6v1aP50516 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms