Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LtbrP50284 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LtbrP50284 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.72■■□□□ 1.07
LtbrP50284 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LtbrP50284 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LtbrP50284 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LtbrP50284 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LtbrP50284 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LtbrP50284 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.71■■□□□ 1.07
LtbrP50284 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.71■■□□□ 1.07
LtbrP50284 Gm6659-201ENSMUST00000174752 547 ntBASIC21.71■■□□□ 1.07
LtbrP50284 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.71■■□□□ 1.07
LtbrP50284 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LtbrP50284 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LtbrP50284 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LtbrP50284 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LtbrP50284 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LtbrP50284 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
LtbrP50284 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LtbrP50284 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LtbrP50284 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.7■■□□□ 1.06
LtbrP50284 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LtbrP50284 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LtbrP50284 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LtbrP50284 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LtbrP50284 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LtbrP50284 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LtbrP50284 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LtbrP50284 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.69■■□□□ 1.06
LtbrP50284 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.69■■□□□ 1.06
LtbrP50284 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LtbrP50284 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Gm10517-202ENSMUST00000192970 758 ntBASIC21.68■■□□□ 1.06
LtbrP50284 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.68■■□□□ 1.06
LtbrP50284 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.68■■□□□ 1.06
LtbrP50284 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LtbrP50284 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LtbrP50284 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LtbrP50284 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LtbrP50284 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LtbrP50284 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LtbrP50284 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
LtbrP50284 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.66■■□□□ 1.06
LtbrP50284 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LtbrP50284 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LtbrP50284 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LtbrP50284 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.65■■□□□ 1.06
LtbrP50284 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LtbrP50284 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LtbrP50284 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LtbrP50284 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.65■■□□□ 1.06
LtbrP50284 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.65■■□□□ 1.06
LtbrP50284 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LtbrP50284 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LtbrP50284 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LtbrP50284 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.65■■□□□ 1.06
LtbrP50284 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LtbrP50284 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LtbrP50284 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LtbrP50284 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LtbrP50284 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LtbrP50284 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.64■■□□□ 1.06
LtbrP50284 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LtbrP50284 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LtbrP50284 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LtbrP50284 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LtbrP50284 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms