Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LdlrP35951 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LdlrP35951 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.33■□□□□ 0.52
LdlrP35951 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LdlrP35951 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.33■□□□□ 0.52
LdlrP35951 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LdlrP35951 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LdlrP35951 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
LdlrP35951 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Gm7860-201ENSMUST00000121190 879 ntBASIC18.32■□□□□ 0.52
LdlrP35951 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LdlrP35951 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LdlrP35951 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LdlrP35951 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LdlrP35951 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LdlrP35951 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.31■□□□□ 0.52
LdlrP35951 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.31■□□□□ 0.52
LdlrP35951 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LdlrP35951 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.31■□□□□ 0.52
LdlrP35951 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LdlrP35951 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.31■□□□□ 0.52
LdlrP35951 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LdlrP35951 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LdlrP35951 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.3■□□□□ 0.52
LdlrP35951 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LdlrP35951 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.3■□□□□ 0.52
LdlrP35951 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LdlrP35951 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LdlrP35951 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LdlrP35951 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.29■□□□□ 0.52
LdlrP35951 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.29■□□□□ 0.52
LdlrP35951 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LdlrP35951 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LdlrP35951 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LdlrP35951 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LdlrP35951 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LdlrP35951 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LdlrP35951 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LdlrP35951 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.27■□□□□ 0.52
LdlrP35951 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.27■□□□□ 0.52
LdlrP35951 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LdlrP35951 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LdlrP35951 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms