Protein–RNA interactions for Protein: P31311

Hoxa11, Homeobox protein Hox-A11, mousemouse

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa11P31311 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hoxa11P31311 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Hoxa11P31311 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.73■□□□□ 0.91
Hoxa11P31311 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.73■□□□□ 0.91
Hoxa11P31311 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.73■□□□□ 0.91
Hoxa11P31311 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Flg-201ENSMUST00000050758 1488 ntBASIC20.73■□□□□ 0.91
Hoxa11P31311 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa11P31311 BC021767-201ENSMUST00000126387 1716 ntBASIC20.73■□□□□ 0.91
Hoxa11P31311 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.72■□□□□ 0.91
Hoxa11P31311 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.72■□□□□ 0.91
Hoxa11P31311 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.72■□□□□ 0.91
Hoxa11P31311 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa11P31311 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Hoxa11P31311 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Gm18666-201ENSMUST00000190039 958 ntBASIC20.71■□□□□ 0.91
Hoxa11P31311 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Hoxa11P31311 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa11P31311 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa11P31311 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.7■□□□□ 0.9
Hoxa11P31311 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.7■□□□□ 0.9
Hoxa11P31311 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Hoxa11P31311 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa11P31311 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.7■□□□□ 0.9
Hoxa11P31311 Mtag2-201ENSMUST00000058665 714 ntBASIC20.7■□□□□ 0.9
Hoxa11P31311 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa11P31311 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.7■□□□□ 0.9
Hoxa11P31311 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa11P31311 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Hoxa11P31311 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa11P31311 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa11P31311 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Gm13158-201ENSMUST00000122007 736 ntBASIC20.69■□□□□ 0.9
Hoxa11P31311 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.69■□□□□ 0.9
Hoxa11P31311 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hoxa11P31311 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa11P31311 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hoxa11P31311 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hoxa11P31311 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hoxa11P31311 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hoxa11P31311 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.68■□□□□ 0.9
Hoxa11P31311 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hoxa11P31311 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Zfp783-201ENSMUST00000095946 670 ntBASIC20.68■□□□□ 0.9
Hoxa11P31311 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.68■□□□□ 0.9
Hoxa11P31311 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.68■□□□□ 0.9
Hoxa11P31311 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hoxa11P31311 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa11P31311 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxa11P31311 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa11P31311 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxa11P31311 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.67■□□□□ 0.9
Hoxa11P31311 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.67■□□□□ 0.9
Hoxa11P31311 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms