Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.94■□□□□ 0.62
Nfkb1P25799 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.94■□□□□ 0.62
Nfkb1P25799 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.94■□□□□ 0.62
Nfkb1P25799 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Nfkb1P25799 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Nfkb1P25799 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nfkb1P25799 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nfkb1P25799 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nfkb1P25799 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nfkb1P25799 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nfkb1P25799 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.93■□□□□ 0.62
Nfkb1P25799 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Gm2399-201ENSMUST00000104944 225 ntBASIC18.92■□□□□ 0.62
Nfkb1P25799 Gm11249-201ENSMUST00000117071 859 ntBASIC18.92■□□□□ 0.62
Nfkb1P25799 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.92■□□□□ 0.62
Nfkb1P25799 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Nfkb1P25799 Gm10252-201ENSMUST00000209541 832 ntBASIC18.92■□□□□ 0.62
Nfkb1P25799 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.92■□□□□ 0.62
Nfkb1P25799 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nfkb1P25799 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nfkb1P25799 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.91■□□□□ 0.62
Nfkb1P25799 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nfkb1P25799 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Nfkb1P25799 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Gm5643-201ENSMUST00000117081 966 ntBASIC18.9■□□□□ 0.62
Nfkb1P25799 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.9■□□□□ 0.62
Nfkb1P25799 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nfkb1P25799 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nfkb1P25799 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nfkb1P25799 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nfkb1P25799 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nfkb1P25799 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Nfkb1P25799 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nfkb1P25799 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nfkb1P25799 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.89■□□□□ 0.62
Nfkb1P25799 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nfkb1P25799 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nfkb1P25799 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nfkb1P25799 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nfkb1P25799 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nfkb1P25799 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nfkb1P25799 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.88■□□□□ 0.61
Nfkb1P25799 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.88■□□□□ 0.61
Nfkb1P25799 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms