Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Gm18666-201ENSMUST00000190039 958 ntBASIC20.04■□□□□ 0.8
Pde6bP23440 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.04■□□□□ 0.8
Pde6bP23440 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6bP23440 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Gm6576-201ENSMUST00000169678 883 ntBASIC20.03■□□□□ 0.8
Pde6bP23440 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.03■□□□□ 0.8
Pde6bP23440 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.03■□□□□ 0.8
Pde6bP23440 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.03■□□□□ 0.8
Pde6bP23440 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
Pde6bP23440 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6bP23440 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Pde6bP23440 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.02■□□□□ 0.8
Pde6bP23440 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Gm11249-201ENSMUST00000117071 859 ntBASIC20.02■□□□□ 0.8
Pde6bP23440 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.02■□□□□ 0.8
Pde6bP23440 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6bP23440 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pde6bP23440 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pde6bP23440 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.01■□□□□ 0.79
Pde6bP23440 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.01■□□□□ 0.79
Pde6bP23440 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.01■□□□□ 0.79
Pde6bP23440 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.01■□□□□ 0.79
Pde6bP23440 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6bP23440 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pde6bP23440 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pde6bP23440 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pde6bP23440 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.99■□□□□ 0.79
Pde6bP23440 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Gm2399-201ENSMUST00000104944 225 ntBASIC19.99■□□□□ 0.79
Pde6bP23440 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.99■□□□□ 0.79
Pde6bP23440 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.99■□□□□ 0.79
Pde6bP23440 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6bP23440 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pde6bP23440 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pde6bP23440 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.98■□□□□ 0.79
Pde6bP23440 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.98■□□□□ 0.79
Pde6bP23440 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.98■□□□□ 0.79
Pde6bP23440 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.98■□□□□ 0.79
Pde6bP23440 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms