Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd48P18181 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd48P18181 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd48P18181 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cd48P18181 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd48P18181 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cd48P18181 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.55■□□□□ 0.24
Cd48P18181 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.55■□□□□ 0.24
Cd48P18181 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd48P18181 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd48P18181 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd48P18181 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
Cd48P18181 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Cd48P18181 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cd48P18181 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.54■□□□□ 0.24
Cd48P18181 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.54■□□□□ 0.24
Cd48P18181 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
Cd48P18181 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cd48P18181 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cd48P18181 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd48P18181 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cd48P18181 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cd48P18181 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Cd48P18181 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.53■□□□□ 0.24
Cd48P18181 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cd48P18181 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cd48P18181 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cd48P18181 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd48P18181 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.52■□□□□ 0.24
Cd48P18181 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.52■□□□□ 0.24
Cd48P18181 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.52■□□□□ 0.24
Cd48P18181 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.52■□□□□ 0.24
Cd48P18181 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cd48P18181 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cd48P18181 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd48P18181 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd48P18181 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cd48P18181 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd48P18181 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd48P18181 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd48P18181 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd48P18181 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Cd48P18181 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.51■□□□□ 0.23
Cd48P18181 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cd48P18181 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Gm45417-201ENSMUST00000209533 758 ntBASIC16.51■□□□□ 0.23
Cd48P18181 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cd48P18181 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.51■□□□□ 0.23
Cd48P18181 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cd48P18181 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cd48P18181 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd48P18181 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cd48P18181 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cd48P18181 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.5■□□□□ 0.23
Cd48P18181 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cd48P18181 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cd48P18181 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cd48P18181 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.5■□□□□ 0.23
Cd48P18181 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd48P18181 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms