Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.36■□□□□ 0.85
Msh3P13705 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.36■□□□□ 0.85
Msh3P13705 Gm7290-201ENSMUST00000104990 617 ntBASIC20.36■□□□□ 0.85
Msh3P13705 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Gm12918-201ENSMUST00000120234 636 ntBASIC20.36■□□□□ 0.85
Msh3P13705 Gm15710-201ENSMUST00000121821 636 ntBASIC20.36■□□□□ 0.85
Msh3P13705 Gm5075-201ENSMUST00000196916 622 ntBASIC20.36■□□□□ 0.85
Msh3P13705 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.36■□□□□ 0.85
Msh3P13705 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.36■□□□□ 0.85
Msh3P13705 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh3P13705 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Msh3P13705 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Msh3P13705 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.35■□□□□ 0.85
Msh3P13705 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.35■□□□□ 0.85
Msh3P13705 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh3P13705 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh3P13705 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh3P13705 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh3P13705 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Msh3P13705 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Msh3P13705 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.34■□□□□ 0.85
Msh3P13705 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Gm6365-201ENSMUST00000054711 744 ntBASIC20.34■□□□□ 0.85
Msh3P13705 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh3P13705 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.33■□□□□ 0.85
Msh3P13705 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh3P13705 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh3P13705 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh3P13705 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh3P13705 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.33■□□□□ 0.85
Msh3P13705 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Msh3P13705 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Msh3P13705 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Msh3P13705 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Msh3P13705 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Msh3P13705 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.32■□□□□ 0.84
Msh3P13705 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Msh3P13705 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh3P13705 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.31■□□□□ 0.84
Msh3P13705 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Gm6211-202ENSMUST00000167849 925 ntBASIC20.31■□□□□ 0.84
Msh3P13705 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.31■□□□□ 0.84
Msh3P13705 Gm7291-201ENSMUST00000199147 382 ntBASIC20.31■□□□□ 0.84
Msh3P13705 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.31■□□□□ 0.84
Msh3P13705 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh3P13705 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Msh3P13705 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.3■□□□□ 0.84
Msh3P13705 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Msh3P13705 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Gm13148-201ENSMUST00000118892 745 ntBASIC20.3■□□□□ 0.84
Msh3P13705 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Msh3P13705 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh3P13705 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Msh3P13705 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.3■□□□□ 0.84
Msh3P13705 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh3P13705 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.29■□□□□ 0.84
Msh3P13705 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh3P13705 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Msh3P13705 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms