Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Surf1P09925 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Surf1P09925 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Surf1P09925 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.83■□□□□ 0.92
Surf1P09925 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Surf1P09925 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.82■□□□□ 0.92
Surf1P09925 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.82■□□□□ 0.92
Surf1P09925 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Surf1P09925 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Surf1P09925 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.81■□□□□ 0.92
Surf1P09925 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.81■□□□□ 0.92
Surf1P09925 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Surf1P09925 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Surf1P09925 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Surf1P09925 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.8■□□□□ 0.92
Surf1P09925 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Surf1P09925 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
Surf1P09925 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Surf1P09925 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Surf1P09925 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Surf1P09925 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.79■□□□□ 0.92
Surf1P09925 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Surf1P09925 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.78■□□□□ 0.92
Surf1P09925 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Surf1P09925 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Surf1P09925 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.78■□□□□ 0.92
Surf1P09925 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Surf1P09925 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Surf1P09925 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Surf1P09925 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Surf1P09925 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Surf1P09925 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Surf1P09925 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Surf1P09925 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Surf1P09925 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Surf1P09925 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Surf1P09925 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Surf1P09925 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Surf1P09925 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Surf1P09925 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.76■□□□□ 0.91
Surf1P09925 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Surf1P09925 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Surf1P09925 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Surf1P09925 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Surf1P09925 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.75■□□□□ 0.91
Surf1P09925 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Surf1P09925 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Gm6420-201ENSMUST00000193885 723 ntBASIC20.75■□□□□ 0.91
Surf1P09925 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Surf1P09925 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Surf1P09925 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.75■□□□□ 0.91
Surf1P09925 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.74■□□□□ 0.91
Surf1P09925 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Surf1P09925 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Surf1P09925 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.74■□□□□ 0.91
Surf1P09925 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.74■□□□□ 0.91
Surf1P09925 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Surf1P09925 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Surf1P09925 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.73■□□□□ 0.91
Surf1P09925 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Surf1P09925 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Surf1P09925 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Surf1P09925 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Surf1P09925 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Surf1P09925 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms