Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.62■□□□□ 0.73
TnfP06804 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TnfP06804 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.61■□□□□ 0.73
TnfP06804 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.61■□□□□ 0.73
TnfP06804 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
TnfP06804 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TnfP06804 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TnfP06804 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Gm10812-201ENSMUST00000099864 546 ntBASIC19.6■□□□□ 0.73
TnfP06804 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TnfP06804 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TnfP06804 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TnfP06804 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.59■□□□□ 0.73
TnfP06804 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TnfP06804 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.59■□□□□ 0.73
TnfP06804 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TnfP06804 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TnfP06804 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.58■□□□□ 0.73
TnfP06804 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.58■□□□□ 0.73
TnfP06804 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TnfP06804 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TnfP06804 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TnfP06804 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TnfP06804 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TnfP06804 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.58■□□□□ 0.73
TnfP06804 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TnfP06804 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TnfP06804 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.58■□□□□ 0.72
TnfP06804 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TnfP06804 Flg-201ENSMUST00000050758 1488 ntBASIC19.58■□□□□ 0.72
TnfP06804 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TnfP06804 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TnfP06804 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TnfP06804 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.57■□□□□ 0.72
TnfP06804 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.57■□□□□ 0.72
TnfP06804 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TnfP06804 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TnfP06804 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TnfP06804 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TnfP06804 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TnfP06804 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TnfP06804 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TnfP06804 Gm11927-201ENSMUST00000118472 759 ntBASIC19.56■□□□□ 0.72
TnfP06804 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.56■□□□□ 0.72
TnfP06804 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TnfP06804 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.56■□□□□ 0.72
TnfP06804 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.56■□□□□ 0.72
TnfP06804 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TnfP06804 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.56■□□□□ 0.72
TnfP06804 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TnfP06804 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TnfP06804 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.55■□□□□ 0.72
TnfP06804 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.55■□□□□ 0.72
TnfP06804 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TnfP06804 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TnfP06804 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TnfP06804 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TnfP06804 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TnfP06804 Notumos-201ENSMUST00000151998 2659 ntBASIC19.55■□□□□ 0.72
TnfP06804 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms