Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.22■□□□□ 0.67
PrnpP04925 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PrnpP04925 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PrnpP04925 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.22■□□□□ 0.67
PrnpP04925 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.21■□□□□ 0.67
PrnpP04925 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.21■□□□□ 0.67
PrnpP04925 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.21■□□□□ 0.67
PrnpP04925 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Gm5417-201ENSMUST00000079706 384 ntBASIC19.21■□□□□ 0.67
PrnpP04925 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PrnpP04925 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.2■□□□□ 0.66
PrnpP04925 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PrnpP04925 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PrnpP04925 Gm43183-201ENSMUST00000200632 547 ntBASIC19.2■□□□□ 0.66
PrnpP04925 Gm9987-201ENSMUST00000069768 567 ntBASIC19.2■□□□□ 0.66
PrnpP04925 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrnpP04925 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PrnpP04925 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
PrnpP04925 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PrnpP04925 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.18■□□□□ 0.66
PrnpP04925 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.18■□□□□ 0.66
PrnpP04925 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.18■□□□□ 0.66
PrnpP04925 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PrnpP04925 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrnpP04925 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrnpP04925 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrnpP04925 Golph3-202ENSMUST00000226517 2359 ntBASIC19.17■□□□□ 0.66
PrnpP04925 Gm15375-201ENSMUST00000119510 849 ntBASIC19.17■□□□□ 0.66
PrnpP04925 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.17■□□□□ 0.66
PrnpP04925 Gm38285-201ENSMUST00000192928 922 ntBASIC19.17■□□□□ 0.66
PrnpP04925 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PrnpP04925 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrnpP04925 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PrnpP04925 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.17■□□□□ 0.66
PrnpP04925 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PrnpP04925 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PrnpP04925 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PrnpP04925 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.16■□□□□ 0.66
PrnpP04925 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.16■□□□□ 0.66
PrnpP04925 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.16■□□□□ 0.66
PrnpP04925 Gm18025-201ENSMUST00000221733 862 ntBASIC19.16■□□□□ 0.66
PrnpP04925 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.16■□□□□ 0.66
PrnpP04925 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PrnpP04925 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PrnpP04925 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PrnpP04925 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrnpP04925 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.15■□□□□ 0.66
PrnpP04925 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PrnpP04925 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
PrnpP04925 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PrnpP04925 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrnpP04925 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.15■□□□□ 0.66
PrnpP04925 Gm6433-201ENSMUST00000118634 875 ntBASIC19.15■□□□□ 0.66
PrnpP04925 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.15■□□□□ 0.66
PrnpP04925 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PrnpP04925 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrnpP04925 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.15■□□□□ 0.66
PrnpP04925 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrnpP04925 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms