Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.75■□□□□ 0.43
P04213 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P04213 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.74■□□□□ 0.43
P04213 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.74■□□□□ 0.43
P04213 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
P04213 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Fst-202ENSMUST00000223640 2612 ntBASIC17.74■□□□□ 0.43
P04213 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04213 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
P04213 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04213 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.73■□□□□ 0.43
P04213 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04213 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04213 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.73■□□□□ 0.43
P04213 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04213 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.72■□□□□ 0.43
P04213 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.72■□□□□ 0.43
P04213 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.72■□□□□ 0.43
P04213 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P04213 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.72■□□□□ 0.43
P04213 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.72■□□□□ 0.43
P04213 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.72■□□□□ 0.43
P04213 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
P04213 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04213 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
P04213 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04213 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04213 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.71■□□□□ 0.43
P04213 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04213 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04213 Gm10493-201ENSMUST00000097270 612 ntBASIC17.71■□□□□ 0.43
P04213 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04213 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04213 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P04213 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04213 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
P04213 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04213 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
P04213 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
P04213 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
P04213 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04213 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04213 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04213 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.7■□□□□ 0.42
P04213 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.7■□□□□ 0.42
P04213 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.69■□□□□ 0.42
P04213 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.69■□□□□ 0.42
P04213 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.69■□□□□ 0.42
P04213 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P04213 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
P04213 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
P04213 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.68■□□□□ 0.42
P04213 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
P04213 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.68■□□□□ 0.42
P04213 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.68■□□□□ 0.42
P04213 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P04213 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
P04213 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P04213 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
P04213 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms