Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
P01734 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.11■□□□□ 0.81
P01734 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01734 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.1■□□□□ 0.81
P01734 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01734 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
P01734 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01734 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
P01734 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01734 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.1■□□□□ 0.81
P01734 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.1■□□□□ 0.81
P01734 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01734 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
P01734 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01734 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
P01734 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.09■□□□□ 0.81
P01734 Gm27011-201ENSMUST00000182352 972 ntBASIC20.09■□□□□ 0.81
P01734 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
P01734 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
P01734 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01734 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.08■□□□□ 0.81
P01734 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01734 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01734 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01734 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.08■□□□□ 0.81
P01734 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01734 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01734 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01734 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
P01734 Golph3-205ENSMUST00000228671 2842 ntBASIC20.08■□□□□ 0.8
P01734 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Gm12527-201ENSMUST00000117967 564 ntBASIC20.07■□□□□ 0.8
P01734 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.07■□□□□ 0.8
P01734 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01734 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
P01734 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
P01734 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.06■□□□□ 0.8
P01734 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.06■□□□□ 0.8
P01734 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01734 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P01734 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
P01734 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.05■□□□□ 0.8
P01734 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.05■□□□□ 0.8
P01734 Gm20049-201ENSMUST00000219950 730 ntBASIC20.05■□□□□ 0.8
P01734 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P01734 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01734 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.04■□□□□ 0.8
P01734 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01734 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01734 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01734 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
P01734 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01734 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
P01734 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01734 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
P01734 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01734 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms