Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna4O70174 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna4O70174 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.63■□□□□ 0.57
Chrna4O70174 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna4O70174 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna4O70174 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna4O70174 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.63■□□□□ 0.57
Chrna4O70174 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chrna4O70174 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna4O70174 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna4O70174 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.62■□□□□ 0.57
Chrna4O70174 Gm27405-201ENSMUST00000184201 112 ntBASIC18.62■□□□□ 0.57
Chrna4O70174 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Chrna4O70174 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna4O70174 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna4O70174 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna4O70174 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chrna4O70174 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.61■□□□□ 0.57
Chrna4O70174 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.61■□□□□ 0.57
Chrna4O70174 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chrna4O70174 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.6■□□□□ 0.57
Chrna4O70174 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Chrna4O70174 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chrna4O70174 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.6■□□□□ 0.57
Chrna4O70174 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.59■□□□□ 0.57
Chrna4O70174 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.59■□□□□ 0.57
Chrna4O70174 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
Chrna4O70174 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.59■□□□□ 0.57
Chrna4O70174 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chrna4O70174 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chrna4O70174 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chrna4O70174 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chrna4O70174 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna4O70174 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.58■□□□□ 0.56
Chrna4O70174 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.58■□□□□ 0.56
Chrna4O70174 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna4O70174 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.58■□□□□ 0.56
Chrna4O70174 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.58■□□□□ 0.56
Chrna4O70174 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Chrna4O70174 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Chrna4O70174 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna4O70174 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna4O70174 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna4O70174 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna4O70174 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.58■□□□□ 0.56
Chrna4O70174 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna4O70174 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna4O70174 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chrna4O70174 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Chrna4O70174 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.57■□□□□ 0.56
Chrna4O70174 Gm7291-201ENSMUST00000199147 382 ntBASIC18.57■□□□□ 0.56
Chrna4O70174 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.57■□□□□ 0.56
Chrna4O70174 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.57■□□□□ 0.56
Chrna4O70174 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.57■□□□□ 0.56
Chrna4O70174 Gm6365-201ENSMUST00000054711 744 ntBASIC18.57■□□□□ 0.56
Chrna4O70174 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chrna4O70174 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna4O70174 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Chrna4O70174 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chrna4O70174 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.56■□□□□ 0.56
Chrna4O70174 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna4O70174 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Chrna4O70174 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.56■□□□□ 0.56
Chrna4O70174 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna4O70174 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna4O70174 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna4O70174 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna4O70174 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna4O70174 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms