Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Gm17971-201ENSMUST00000190239 806 ntBASIC18.48■□□□□ 0.55
Phox2bO35690 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Phox2bO35690 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.48■□□□□ 0.55
Phox2bO35690 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Phox2bO35690 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.48■□□□□ 0.55
Phox2bO35690 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Phox2bO35690 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Phox2bO35690 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Phox2bO35690 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Phox2bO35690 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.47■□□□□ 0.55
Phox2bO35690 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.47■□□□□ 0.55
Phox2bO35690 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Phox2bO35690 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Phox2bO35690 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.46■□□□□ 0.55
Phox2bO35690 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Phox2bO35690 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Gm10013-201ENSMUST00000106074 672 ntBASIC18.46■□□□□ 0.55
Phox2bO35690 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.46■□□□□ 0.55
Phox2bO35690 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Phox2bO35690 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Phox2bO35690 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Phox2bO35690 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Phox2bO35690 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.46■□□□□ 0.54
Phox2bO35690 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.45■□□□□ 0.54
Phox2bO35690 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.45■□□□□ 0.54
Phox2bO35690 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.45■□□□□ 0.54
Phox2bO35690 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Phox2bO35690 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Phox2bO35690 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.45■□□□□ 0.54
Phox2bO35690 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Phox2bO35690 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Phox2bO35690 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Phox2bO35690 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Phox2bO35690 AA414768-201ENSMUST00000121924 1257 ntBASIC18.44■□□□□ 0.54
Phox2bO35690 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Phox2bO35690 Gm21814-202ENSMUST00000203277 873 ntBASIC18.44■□□□□ 0.54
Phox2bO35690 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.44■□□□□ 0.54
Phox2bO35690 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Phox2bO35690 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.44■□□□□ 0.54
Phox2bO35690 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Phox2bO35690 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Phox2bO35690 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Phox2bO35690 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Phox2bO35690 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.43■□□□□ 0.54
Phox2bO35690 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Phox2bO35690 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Phox2bO35690 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.42■□□□□ 0.54
Phox2bO35690 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.42■□□□□ 0.54
Phox2bO35690 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Phox2bO35690 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms