Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ptch2O35595 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ptch2O35595 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.9■□□□□ 0.62
Ptch2O35595 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ptch2O35595 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.9■□□□□ 0.62
Ptch2O35595 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.9■□□□□ 0.62
Ptch2O35595 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.9■□□□□ 0.62
Ptch2O35595 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ptch2O35595 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Ptch2O35595 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ptch2O35595 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ptch2O35595 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptch2O35595 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.89■□□□□ 0.61
Ptch2O35595 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.89■□□□□ 0.61
Ptch2O35595 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptch2O35595 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.89■□□□□ 0.61
Ptch2O35595 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptch2O35595 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ptch2O35595 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ptch2O35595 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.89■□□□□ 0.61
Ptch2O35595 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Ptch2O35595 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.88■□□□□ 0.61
Ptch2O35595 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.88■□□□□ 0.61
Ptch2O35595 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.88■□□□□ 0.61
Ptch2O35595 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptch2O35595 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.87■□□□□ 0.61
Ptch2O35595 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ptch2O35595 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptch2O35595 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ptch2O35595 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ptch2O35595 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.86■□□□□ 0.61
Ptch2O35595 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptch2O35595 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.86■□□□□ 0.61
Ptch2O35595 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.85■□□□□ 0.61
Ptch2O35595 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.85■□□□□ 0.61
Ptch2O35595 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.85■□□□□ 0.61
Ptch2O35595 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.85■□□□□ 0.61
Ptch2O35595 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptch2O35595 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.84■□□□□ 0.61
Ptch2O35595 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.84■□□□□ 0.61
Ptch2O35595 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ptch2O35595 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.84■□□□□ 0.61
Ptch2O35595 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptch2O35595 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ptch2O35595 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptch2O35595 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.83■□□□□ 0.61
Ptch2O35595 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptch2O35595 Gm715-201ENSMUST00000117865 831 ntBASIC18.83■□□□□ 0.6
Ptch2O35595 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ptch2O35595 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms