Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Gm22240-201ENSMUST00000175225 82 ntBASIC19.72■□□□□ 0.75
Usp35M0QWN7 Gm20049-201ENSMUST00000219950 730 ntBASIC19.72■□□□□ 0.75
Usp35M0QWN7 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.72■□□□□ 0.75
Usp35M0QWN7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp35M0QWN7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp35M0QWN7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.71■□□□□ 0.75
Usp35M0QWN7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Gm8520-201ENSMUST00000186517 868 ntBASIC19.71■□□□□ 0.75
Usp35M0QWN7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.71■□□□□ 0.75
Usp35M0QWN7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.71■□□□□ 0.75
Usp35M0QWN7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp35M0QWN7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp35M0QWN7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.69■□□□□ 0.74
Usp35M0QWN7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp35M0QWN7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp35M0QWN7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.68■□□□□ 0.74
Usp35M0QWN7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Usp35M0QWN7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Gm26524-201ENSMUST00000192339 390 ntBASIC19.68■□□□□ 0.74
Usp35M0QWN7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp35M0QWN7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp35M0QWN7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.67■□□□□ 0.74
Usp35M0QWN7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.66■□□□□ 0.74
Usp35M0QWN7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp35M0QWN7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms